X-rays are light waves with wavelengths on the size of atoms to biological cells. Because of their atom to cell sized wavelengths, x-rays have been an invaluable probe for science on the nanoscale. Key to using x-rays is the understanding of how x-rays interact with matter. This project supports the development of a fundamental understanding of the dynamical processes induced by intense x-rays in complex systems. The ultrahigh intensity regime of x-ray interactions with matter was initiated with the advent of the LCLS x-ray free-electron laser (XFEL). The intensities in both the soft and hard x-ray regime can strip electrons from atoms from the inside out and create transient states of matter as the x-ray pulse progresses through the target. Using nanoscale clusters, particular attention is paid to the ionization dynamics starting on the atomic level, the nanoplasma formation, and the implications of the rapidly changing sample to the ultrafast x-ray scattering process. A hybrid quantum/classical simulation methodology will be used to investigate the interactions of intense XFEL pulses with nanoscale samples to understand the ultrafast dynamics and its connection to x-ray imaging. This work is proposed is an important step forward in understanding high-brightness, coherent x-ray laser pulses and their interactions with matter. The completion of the proposed work will enhance capabilities 10,000-fold and establish the applied methodology as an effective large-scale computational tool for the new research frontier of ultrafast x-ray science.